hands-on tutorial

Hands-on for 'De novo transcriptome reconstruction with RNA-Seq' tutorial

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The questions this addresses are:
- What genes are differentially expressed between G1E cells and megakaryocytes?
- How can we generate a transcriptome de novo from RNA sequencing data?

The objectives are:
- Analysis of RNA sequencing data using a reference genome
- Reconstruction of transcripts without reference transcriptome (de novo)
- Analysis of differentially expressed genes

Licence: Creative Commons Attribution 4.0 International

Keywords: transcriptomics

Target audience: Students

Resource type: hands-on tutorial

Authors: Mallory Freeberg, Mo Heydarian

Contributors: Mallory Freeberg, Mo Heydarian

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