Short summary of the previous session
1.Scope of the DM
2.DMP Content and structure
Practical activities
3.Planning the DM of a simple project
4.DMP evaluation
Scientific topics: Data management, FAIR data
Keywords: ELIXIR-CONVERGE, DMP, data management plan, research data management, FAIR principles, DMP tools, DMP templates, tools, template, competency, DMP evaluation, evaluation, on-line, e-learning
Research Data Management Introduction for researchershttps://b2drop.bsc.es/index.php/s/QNMKXn7M3TQzwCthttp://tess.elixir-uk.org/materials/research-data-management-introduction-for-researchersShort summary of the previous session
1.Scope of the DM
2.DMP Content and structure
Practical activities
3.Planning the DM of a simple project
4.DMP evaluationNadia TonelloData managementFAIR dataELIXIR-CONVERGE, DMP, data management plan, research data management, FAIR principles, DMP tools, DMP templates, tools, template, competency, DMP evaluation, evaluation, on-line, e-learningResearchersPhD students
Discover the role of research, clinical investigation and data sharing in diagnosing rare diseases. This course offers an exploration of key questions around rare disease diagnostic research and issues today, as well as insights into patient experiences.
Scientific topics: Rare diseases
Keywords: Rare Diseases & Research
Resource type: e-learning
EJP RD MOOC "Diagnosing Rare Diseases: from the Clinic to Research and back"https://www.futurelearn.com/courses/rare-genetic-diseasehttp://tess.elixir-uk.org/materials/ejp-rd-mooc-diagnosing-rare-diseases-from-the-clinic-to-research-and-backDiscover the role of research, clinical investigation and data sharing in diagnosing rare diseases. This course offers an exploration of key questions around rare disease diagnostic research and issues today, as well as insights into patient experiences.Rare diseasesRare Diseases & ResearchPhD studentspostdoctoral researchersResearchershealthcare professionalsPatient Advocates rare disease patients representatives
Target audience for the webinars are clinicians, genetic counsellors, clinical scientists and other genetics health professionals. The presentation itself lasts approximately 20-30 minutes, and viewers have the opportunity to send questions on the subject area which will be addressed in a...
Scientific topics: Rare diseases
Keywords: Rare Diseases & Research
Resource type: Webinar, e-learning
Education and Training webinars on genetic tumor risk syndromes (ERN GENTURIS)https://www.genturis.eu/l=eng/Education-and-Training/Webinars.htmlhttp://tess.elixir-uk.org/materials/genturis-education-and-training-webinarsTarget audience for the webinars are clinicians, genetic counsellors, clinical scientists and other genetics health professionals. The presentation itself lasts approximately 20-30 minutes, and viewers have the opportunity to send questions on the subject area which will be addressed in a question & answer session afterwards.Rare diseasesRare Diseases & ResearchCliniciansClinical Scientists health professionalsgeneticists
High-throughput sequencing data analysis requires new technical competencies and HPC is one of them. SIB has developed an e-learning module in HPC, as part of the ELIXIR-EXCELERATE project. e-learning has the potential to reach a wider audience, in any location and any time, and can be used...
Keywords: High performance computing, high-performance computing
Resource type: Tutorial, Slideshow, e-learning
High Performance Computing (HPC) in Life Scienceshttps://edu.sib.swiss/course/view.php?name=HPCelhttp://tess.elixir-uk.org/materials/high-performance-computing-hpc-in-life-sciencesHigh-throughput sequencing data analysis requires new technical competencies and HPC is one of them. SIB has developed an e-learning module in HPC, as part of the ELIXIR-EXCELERATE project. e-learning has the potential to reach a wider audience, in any location and any time, and can be used either as the electronic component of a blended training format or as a self-running learning product.Robin EnglerVassilios IoannidisGrégoire RossierVolker FlegelHeinz StockingerBiologyBioinformaticsComputer scienceHigh performance computing, high-performance computingPhD studentsAll postgraduatesLife Science Researchers
This self-learning tutorial aims to present the UNIX environment and to provide the most basic commands to users with no or very little UNIX knowledge.
The examples are taken from various Biological fields but have been chosen carefully to be easily accessible to a wide audience.
At the end of...
Keywords: Problem based learning, Programming, Unix
Resource type: e-learning
UNIX Fundamentalshttps://www.mygoblet.org/training-portal/materials/unix-fundamentalshttp://tess.elixir-uk.org/materials/unix-fundamentals-35adf82d-ae32-449d-9627-43b5d18da8ccThis self-learning tutorial aims to present the UNIX environment and to provide the most basic commands to users with no or very little UNIX knowledge.
The examples are taken from various Biological fields but have been chosen carefully to be easily accessible to a wide audience.
At the end of the course, participants are expected to be able to:
Have some understanding on UNIX systems
Navigate through the UNIX filesystem
Execute and understand some UNIX process commands
Correctly set file permissions
Perform basic file management
Participants are encouraged to follow the tutorial sections sequentially.
The tutorial content is sometimes an oversimplification of the Truth - yes, we know!
Due to the diversity of computer systems, we will just assume that participants do have access to a terminal.
For help, please contact your IT support - or a good friend!Authors are affiliated to the SIB Swiss Institute of Bioinformatics:
Vassilios IoannidisWith some content provided by Frédéric Schütz, Volker Flegel and Heinz StockingerContent integration by Grégoire Rossier and Vassilios IoannidisVassilios IoannidisGrégoire RossierVolker FlegelHeinz StockingerFrédéric SchützProblem based learning, Programming, UnixBench biologistsClinical ScientistsGraduate Studentsbeginner bioinformaticiansbiocurators2014-01-132017-10-09