ELXIR-UK DaSH

In 2021, ELIXIR-UK was granted a UKRI award for the ELIXIR-UK DaSH Fellowship. The University of Bradford leads the project with a delivery team at Cardiff University, the Earlham Institute, the University of Manchester, and the University of Oxford.

The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources, such as the RDMkit and the FAIR Cookbook.

It focuses on building capacity and professionalising data stewardship while leveraging the local expertise within diverse UK institutions – creating a data management culture change from within the institutions.

ELXIR-UK DaSH http://tess.elixir-uk.org/content_providers/elxir-uk-dash In 2021, ELIXIR-UK was granted a UKRI award for the ELIXIR-UK DaSH Fellowship. The University of Bradford leads the project with a delivery team at Cardiff University, the Earlham Institute, the University of Manchester, and the University of Oxford. The project aims to embed Research Data Management (RDM) know-how into UK universities and institutes by producing and delivering training in FAIR data stewardship using ELIXIR-UK knowledge and resources, such as the RDMkit and the FAIR Cookbook. It focuses on building capacity and professionalising data stewardship while leveraging the local expertise within diverse UK institutions – creating a data management culture change from within the institutions. /system/content_providers/images/000/000/652/original/elixir-uk-dash-logo.svg?1660752689
Showing 47 materials out of 47. View all results.
RDMbites: Sensitive data

The RDMbites playlist for learning how to manage sensitive data.

Keywords: sensitive data, data management

Resource type: Video

RDMbites: Sequencing data

The RDMbites collection to learn how to manage sequencing data

Keywords: transcriptomics, FASTQ, FastQC, Sequencing

Resource type: Video

RDMbites: Image data

The RDMbites collection to learn to manage biological image data

Keywords: imaging, data management

Resource type: Video

RDMbite | Bioimage metadata – REMBI: specimen

In this RDMbite, you will learn about REMBI Specimen, the metadata you should be collecting to describe it and how to store it.

Keywords: REMBI, Image Data, metadata

Resource type: Video

RDMbites | Bioimage metadata – REMBI

In this RDMbite we will be speaking about REMBI and its relevance to annotating bioimage metadata

Keywords: REMBI, metadata

Resource type: Video

RDMbites | Data storage of sensitive data: read-only and encryption

Data storage of sensitive data: read-only and encryption

Keywords: Data storage, sensitive data

Resource type: Video

RDMbites | How to write a data sharing agreement for public use of data

How to write a data sharing agreement for public use of data

Keywords: data sharing, sensitive data

Resource type: Video

RDMbites | How to write a data sharing agreement between collaborators

How to write a data sharing agreement between collaborators

Keywords: data stewardship, data sharing, sensitive data

Resource type: Video

RDMbites | RNAseq expression data

In this RDMbite you will learn about common units for gene, or transcript, expression, including some which you could argue could be retired but are still very common in databases and publications. We’ll discuss the drawbacks of some metrics, and make the case for using TPMs as standard.

Keywords: RNAseq, data

Resource type: Video

RDMbites | Sequencing data QC: trimming

Sequencing data QC, trimming raw sequencing reads

Keywords: sequencing data, FastQC

Resource type: Video

RDMbites | FASTQ format

In this RDMbite you will learn about the data stored within FASTQ files

Keywords: FASTQ, Data storage

Resource type: Video

RDMbites | REDCap: how to backup your project

In this video,I will show you how to back-up your project in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | Sequencing Data QC: causes and consequences

Learning the importance of performing quality control on high-throughput sequencing data.

Keywords: Sequencing, FastQC, QC, data

Resource type: Video

RDMbites | Sequencing Data QC: FastQC metrics

Sequencing data quality control metrics generated by the widely used program FastQC.

Keywords: Sequencing, data, FastQC

Resource type: Video

RDMbites | Storing bioimage data

In this RDMbite you will learn what to consider when planning storage for bioimage data and some ideas of how to organise your data.

Keywords: bioimage, data storage

Resource type: Video

RDMbites | FASTQ files in colorspace

FASTQ files derived from colorspace sequencing.

Keywords: FastQ, Data sharing

Resource type: Video

RDMbites | Sensitive data: an introduction

An introduction to sensitive data in the Life Sciences

Keywords: data, life-sciences, sensitive

Resource type: Video

RDMbites | Storing bioimage metadata with OMERO

Storing bioimage Metadata with OMERO

Keywords: OMERO, bioimaging, data storage

Resource type: Video

RDMbites | Bioimage metadata – REMBI: image data

The image data module of REMBI

Keywords: REMBI, Image Data, data collection

Resource type: Video

RDMbites | Bioimage metadata - REMBI: image acquisition

In this RDMbite you will learn about the Image Acquisition module of REMBI metadata. You will learn about the metadata that should be collected to describe the method of image acquisition and how to store it.

Keywords: Image, REMBI, metadata

Resource type: Video

RDMbites | Bioimage metadata – REMBI: biosample

You will learn about the metadata that should be used to describe each biosample for bioimage data and how to store it.

Keywords: REMBI, biosample, metadata

Resource type: Video

RDMbites | Bioimage metadata – REMBI: analysed data

Here you will learn about the analysed data module of REMBI metadata. You will see what metadata should be collected to describe the analysed data and how to store it

Keywords: REMBI, metadata, bioimage

Resource type: Video

RDMbites | Bioimage metadata – REMBI: image correlation

This RDMbite tells you about the the Image Correlation module of REMBI metadata

Keywords: REMBI, metadata

Resource type: Video

RDMbites | Bioimage metadata – REMBI: study component

In this RDMbite you will learn about another aspect of REMBI metadata: the Study Component. More specifically, you will learn about the types of metadata that should be collected to describe each study component for bioimage data and how to store it.

Keywords: metadata, REMBI

Resource type: Video

RDMbites | Bioimage metadata – REMBI: study

In this RDMbite we will be talking about the first aspect of the REMBI metadata guidelines for bioimaging data.

Keywords: REMBI, metadata

Resource type: Video

RDMbites | What is a Data Steward?

An Introduction to what a Data Steward is

Keywords: Data Steward, Data management

Resource type: Video

RDMbites | REDCap: how to archive your project

In this video, I will show you how to archive your project in REDCap, once you have finished data collection.

Keywords: REDCap, clinical, sensitive data

Resource type: Video

RDMbites | REDCap: how to make changes to your live REDCap project

In this video, I will show you how to make changes to your REDCap project, such as changing existing fields or adding new fields for data collection, while it is live and collecting data.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to request an API token

In this video, I will show you how to request an API token in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to export your data/subsets of data

In this video, I will show you how to export your data/subsets of your data from REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to export your project files

In this video, I’ll show you how to export your project files from REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to find information for a project audit

In this video, I will show you how to find the necessary information you may need for a project audit in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to download PDFs of your surveys

In this video,I will show you how to download files of your surveys and questionnaires from REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: How to disable auto-numbering

In this video, I will show you how to disable auto-numbering, edit a patient ID field, or create a secondary ID field on REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to create a variable with an unknown number of responses

In this video, I will show/demonstrate how to create a question with an unknown number of responses in REDCap

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: Introduction

In this video, you are going to learn what REDCap is, how you can get access to it, what it can be used for, and REDCap training resources.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to auto-fill dates and time

In this video, I will show you how to set date and time fields to auto-fill during data collection on REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to build a medication table

In this video, I will show you how to build a table to capture data on medication in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to disable selected multiple choice options

In this video, you will learn how to disable specific multiple choice options in REDCap, without deleting and recreating the whole field.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to set missing data codes

In this video, I will show you how to set and disable missing data codes in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to run data quality checks

In this video, I will show you how to create and run data quality checks in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to build a report

In this video, I will show you how to build a report in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to add minimum/maximum and date/time formats

In this video, I will show you how to add parameters to your data collection, such as limits on minimum and maximum values, and specific date formats, on REDCap

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | REDCap: how to use the randomization module

In this video, I will show you how to use the randomization module in REDCap.

Keywords: REDCap, sensitive data

Resource type: Video

RDMbites | Computer data security

This RDMbite talks about how to work with data on your computer securely

Keywords: data security, data, sensitive data

Resource type: Video

RDMbites | Machine and human readable file naming

In this RDMbite I will show you how to name your files so that they can be read and interpreted by yourself and others.
This includes filenames that are both machine-readable and human-readable, also using punctuation to be able to order and group sets of files.
Although we use examples of how...

Keywords: Data management

Resource type: Video

RDMbites | Characters to use and avoid in filenames

In this RDMbite I will show you which special characters to use and which to avoid in file names.
Even though we show examples of how to name files, this information applies to naming directories and folders also.

Keywords: Data management

Resource type: Video

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