Workflows
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ChIP-seq workflow
Basic workflow for ChIP-seq analysis
Topic: ChIP-seq
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ChIP-seq workflow (with intermediate data)
Basic workflow for ChIP-seq analysis
Topic: ChIP-seq
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ChIP-seq workflow in Bioconductor
Basic workflow for ChIP-seq analysis using Bioconductor from https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5389943/
Topic: ChIP-seq
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Data Management in Bioinformatics
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EBI metagenomics pipeline 2.0
EBI metagenomics pipeline 2.0
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ELIXIR Structural Bioinformatics 2: Exploring protein domains and functional sites
This training workflow introduces how to search (using query protein sequences or structures) for protein domains, conservation and protein family information, surface and topological interfaces, and possible ligand binding sites.
It is designed to lead you through the process of finding...
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ELIXIR Structural Bioinformatics 3: Predicting the effect of mutation on protein function
This workflow builds on the previous training workflows in this series on building protein models and identifying functional domains or ligand binding sites - and introduces methods to predict how mutations can impact on protein function.
It is designed to lead you through the process of...
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EMBER: A practical guide to Bioinformatics
This practical introduces a range of Web-based databases and tools, allowing their relative strengths and weaknesses to be compared. The practical comprises several modules, each broken down into simple steps.
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Image analysis
Imaging (http://edamontology.org/topic_3382)
Bioimage informatics (EDAM-bioimaging)
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Meta-pipe
meta-pipe
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