Showing 30 events out of 675 (also found 11869 past events)
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Workshops and courses
Introduction to FAIR Research Data Management & Data Management Plan
28 - 29 May 2024
Lausanne, Switzerland
Face-to-face
training reproducibility data management data security open data mark ibberson group -
Workshops and courses
Introduction à la segmentation des nucléoles et extraction de caractéristiques avec Galaxy
11 December 2024
Clermont-Ferrand, France
Face-to-face
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Workshops and courses
Introduction to High-performance Computing (sciCORE Cluster)
17 September 2024
Online
services and resources high-performance computing -
Workshops and courses
NGS - Genome Variant Analysis
5 - 6 September 2024
Online
medicine and health next generation sequencing training agriculture environmental science rémy bruggmann group -
Workshops and courses
First Steps in Parallelization with OpenMP
7 May 2024
Online
API high-performance computing programming training torsten schwede & thierry sengstag group -
Workshops and courses
Docker and Singularity for Reproducible Research: Getting Started with Containers
30 May 2024
Online
reproducibility training container data management data security high-performance computing rémy bruggmann group -
Workshops and courses
Submitting, Finding and Downloading Raw Sequencing Data with ENA
7 June 2024
Online
FAIR data Metadata Data submission -
Workshops and courses
Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions
26 - 28 August 2024
Lausanne, Switzerland
Face-to-face
biodiversity non model organisms evolution and phylogeny genes and genomes comparative genomics evolutionary biology training marc robinson-rechavi group robert waterhouse group christophe dessimoz group
Showing 30 materials out of 2416
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Types of statistical studies
Statistical studies
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ChIP-seq analysis using R - Experimental design and peak calling.
ChIP-Seq Experimental-design Peak-calling Visualisation
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hands-on tutorial
Hands-on for 'Quality Control' tutorial
• beginnerSequence analysis sequence-analysis -
This
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Thalemine tutorials
Thalemine
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Galaxy Server administration - Galaxy from an administrator point of view
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Hypothesis testing
Statistical studies
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Categorical data
Statistical studies
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hands-on tutorial
Hands-on for 'Managing Galaxy on Kubernetes' tutorial
•• intermediateadmin kubernetes -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Oxford Nanopore MinION Data' tutorial
assembly nanopore amr
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hands-on tutorial
Hands-on for 'Identifying tuberculosis transmission links: from SNPs to transmission clusters' tutorial
•• intermediateEvolutionary biology evolution prokaryote one-health -
ChIP-Seq
ChIP-Seq Experimental-design QC ChIP-Seq-QC Data-format Alignment Peak-calling Differential-binding Annotation
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NGS introduction to file formats
HTS-introduction FASTQ BAM VCF WIG CRAM GFF3
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Introduction to NGS and RNA-seq
HTS-introduction Data-format Alignment Differential-expression Feature-summarisation QC
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hands-on tutorial
Hands-on for 'RO-Crate - Introduction' tutorial
• beginnerfair -
Variants: alignment and pre-treatment; GATK
Genomics
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GBS
Genotyping
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RNA-Seq Analysis with Biocluster and R
RNA-Seq Alignment Annotation BAM Differential-expression Exploratory-analysis Expression-estimation FASTA FASTQ Feature-summarisation Pre-processing QC Statistical-model
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RNA-Seq
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EMBO High Throughput Sequencing Data Analysis, Cambridge, UK, 2014
RNA-Seq FASTQ GFF3 BAM Populus-tremula Pre-processing QC Alignment Annotation Expression-estimation Differential-expression R-programming
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RNA-seq module Frederik Coppens
HTS-introduction
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Using ASAP for Single-Cell Analysis
• beginnergenes and genomes biomarkers experimental biology functional genomics next generation sequencing population genomics single-cell biology training transcriptomics bart deplancke group -
Introduction to Containers and Snakemake for Reproducible Research
• beginnercontainer data management high-performance computing reproducibility workflows marc robinson-rechavi group training -
Day 1 - RNA-Seq Analysis
Alignment BAM FASTA FASTQ QC
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Recorded webinar
Exploring metabolite metabolism using the Enzyme Portal
Enzymes Metabolomics
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Material for the course RNA-seq data analysis with Chipster
RNA-Seq FASTQ QC Pre-processing Alignment BAM Expression-estimation Feature-summarisation Differential-expression Statistical-model Exploratory-analysis
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Preprocessing RNA-Seq data
Pre-processing
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ChIP-seq analysis using R - Practical
ChIP-Seq Peak-calling Differential-binding Visualisation Annotation Homo-sapiens R-programming
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Introducing Version Control
Hg
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Recorded webinar
UniProtKB: Increasing our understanding of neurodegenerative disorders through data curation
Neurobiology Function analysis
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