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14 materials found

Target audience: postgrad  or PhD candidates 


Helis Academy course FAIR data stewardship 2021, Day 6, Metadata

This presentation is part of the 3rd edition of the Helis Academy FAIR data stewardship (for life sciences) course
Day 6, March 31, 2021

https://www.aanmelder.nl/fair-data-stewardship-2021
https://helisacademy.com/en/data-analysis-stewardship

Topic: metadata, FAIR Data

Scientific topics: Data management, FAIR data

Operations: Data handling

Keywords: FAIR, Data management planning, Metadata

Resource type: Slidedeck

Helis Academy course FAIR data stewardship 2021, Day 6, FAIR Data

This presentation is part of the 3rd edition of the Helis Academy FAIR data stewardship (for life sciences) course
Day 6, March 31, 2021

https://www.aanmelder.nl/fair-data-stewardship-2021
https://helisacademy.com/en/data-analysis-stewardship

Topic: metadata, FAIR Data

Scientific topics: FAIR data, Data management

Operations: Data handling

Keywords: FAIR data, Data management planning, Metadata

Resource type: Slidedeck

Helis Academy course FAIR data stewardship 2021, Day 5, Data rights

This presentation is part of the 3rd edition of the Helis Academy FAIR data stewardship (for life sciences) course
Day 5, March 29, 2021

https://www.aanmelder.nl/fair-data-stewardship-2021
https://helisacademy.com/en/data-analysis-stewardship

Topic: data rights

Scientific topics: Data management, FAIR data

Operations: Data handling

Keywords: FAIR, data management, Data rights

Resource type: Slidedeck

Data publishing and archival

Slides for the "Data publishing and archival" session of the "Research Data Management and Stewardship Training" held on 14 June 2021 by ELIXIR-Luxembourg.

Keywords: Data publishing, data archiving, Data preserving

Resource type: Presentation

Introduction to research data management, data management planning and services provided by CSC – IT Center for Science

This training video series includes four short videos on research data management. The titles of the videos are the following:

  1. Introduction to data management for life science researchers
  2. Introduction to data management planning
  3. Introduction to sections of a generic ​data management...

Keywords: DMP, RDM, plan, research data management, data management, data management plan, ELIXIR-CONVERGE

Resource type: Series of videos, Video, youtube video

Reproducible analysis

Slides for the "Reproducible analysis" session of the "Best practices in research data management and stewardship" held regularly by ELIXIR-Luxembourg.

Scientific topics: Data architecture, analysis and design

Keywords: Workflows, Literate programming, Reproducible Science, Data analysis

Resource type: Presentation

Genomic Technologies in Clinical Diagnostics: Next Generation Sequencing

This course focuses on genomic sequencing.
Topics covered:
- The changing landscape of genomics: From Sanger sequencing to Next Generation Sequencing
- Overview of Next Generation Sequencing platforms and their methodology
- Targeted resequencing
- Alignment, variant calling and...

Scientific topics: Rare diseases

Keywords: Rare Diseases & Research

Resource type: e-learning

Data Management Planning

Slides for the Data Management Plannning session of the "Research Data Manegement and Stewardship Training" held regularly by ELIXIR-Luxembourg

Keywords: Data management plan

Resource type: Presentation

Introduction to FAIR principles

Slides for the "Introduction to FAIR Principles" session of the "Research Data Manegement and Stewardship Training" held regularly by ELIXIR-Luxembourg.

Keywords: FAIR data

Resource type: Presentation

Groovy Cheminformatics with the Chemistry Development Kit

Book that describes the cheminformatics functionality of the Chemistry Development Kit taking advantage of the Groovy programming language.

Scientific topics: Chemistry, Cheminformatics

Resource type: Book

Clinical Bioinformatics I - Tutor notes

Clinical Bioinformatics I is a 10 credit module of the new MSc in Clinical Bioinformatics, delivered by Nowgen/NGRL and the University of Manchester in the UK. Clinical Bioinformatics is one of the streams of the NHS Scientific Training Programme (STP). The programme is a mixture of work...

Keywords: Clinical bioinformatics, Genomics, Introduction bioinformatics

Bioinformatics: Gene-protein-structure-function

This presentation examines the available in silico tools for protein structure and function prediction. It examines the major protein family databases (PROSITE, PRINTS, Pfam, etc.), and explores why tools like PSI-BLAST, while convenient and easy to use, may not always give optimal results. The...

Keywords: Expert systems, Genequiz, Protein family characterisation, Protein family databases, Protein sequence analysis, Psi blast

InterPro: An introduction

This presentation introduces the background to the InterPro database: what it is, where it came from, and what was the vision behind its creation. It examines in particular whether the database has evolved in line with its original vision, and asks whether the resource is still fit for purpose. 

Keywords: Integrated diagnostic tools, Protein family characterisation, Protein sequence analysis

PRINTS: A protein family database with a difference

A presentation designed to introduce the concept of protein family analysis and characterisation using motif-based methods, with a particular focus on protein fingerprinting. Following a general introduction to sequence analysis, and the fingerprint approach, specific examples are given to...

Keywords: Functional diagnosis, Protein family characterisation, Protein sequence analysis