Target audience: Intermediate or Chemists
Course given at BioSB 2019 for biologists about SPARQL.
Scientific topics: Biology
Operations: Query and retrieval
Keywords: Sparql queries, Sparql syntax
Resource type: Tutorial
Workshop of 1.5h where the eNanoMapper ontology and a few uses are discussed. The exercises walk the audience trough the principles, uses, and demonstrates how they can actively work with the ontology.
Scientific topics: Ontology and terminology, Toxicology
Resource type: Tutorial
Book that describes the cheminformatics functionality of the Chemistry Development Kit taking advantage of the Groovy programming language.
Scientific topics: Chemistry, Cheminformatics
Resource type: Book
BridgeDb is a combination of an application programming interface (API), library, and set of data files for mapping identifiers for identical objects [1]. Identifier mapping databases are available for gene products and metabolites. This Bioconductor Vignette explains how to use BridgeDb in the R...
Keywords: ELIXIR RIR, BridgeDb
Resource type: Tutorial, Vignette
Keywords: Make
Keywords: Webdata
Filename Expansion from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/05-expansion.md.
Keywords: Shell
Keywords: Shell
Instructor's Guide from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/guide.md.
Keywords: Shell
Summing Up from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/08-summing-up.md.
Keywords: Regex
More tools from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/06-more-tools.md.
Keywords: Regex
Keywords: Regex
One last Wrinkle from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/07-one-last-wrinkle.md.
Keywords: Regex
More Patterns from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/05-more-patterns.md.
Keywords: Regex
Simple Patterns from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/02-simple-patterns.md.
Keywords: Regex
Introduction to Regular Expressions from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/01-intro-regex.md.
Keywords: Regex
Under the Hood from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/regex/04-under-the-hood.md.
Keywords: Regex
Keywords: Shell
Keywords: Make
Further reading from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/make/05-futher-reading.md.
Keywords: Make
Automatic variables and wildcards from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/make/02-automatic-variables.md.
Keywords: Make
Keywords: Make
Make Reference from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/make/reference.md.
Keywords: Make
Keywords: Make
Introducing Distributed Version Control, and Introducing Yourself to Git from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/git/00-intro.md.
Keywords: Git
Conversational Git from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/git/01-conversational-git.md.
Keywords: Git
Basic Relational Structure of Git Repositories from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/git/02-relational-structure.md.
Keywords: Git
A comparison of Make and doit from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/doit/make-vs-doit.md.
Keywords: Doit
Keywords: Shell
Working Remotely from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/02-ssh.md.
Keywords: Shell