Training materials
Target audience: Any student, postdoc or RA who has an interest ... or bioinformaticians or scientific researchers, public health professio...
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Online material, hands-on tutorial
Introduction to Docker and Singularity
• beginnerReproducibility Container Singularity -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
FREE online course
Making sense of genomic data: COVID-19 web-based bioinformatics
• beginnerbioinformatics NGS bioinformatics Next generation sequencing data analysis covid-19 sars-cov-2 coronavirus data-analysis data visualization genomics Genomic data pipelines Galaxy nexstrain -
FREE online course
From Swab to Server: Testing, Sequencing, and Sharing During a Pandemic
•• intermediatemetadata Sequencing genomics Genomic data data quality scientific quality assurance data sharing ethics data ethics public health coronavirus sars-cov-2 covid-19 data linkage -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse -
Slides
FAIR data - Module 3 (Metadata)
• beginnerBioinformatics Biology Data management Data handling metadata data annotation life science standards data sharing -
Slides
FAIR data - Module 2 (data life cycle)
• beginnerData management Biology Bioinformatics Data handling Data preserving Data storage -
Slides
FAIR data - Module 1 (research data)
• beginnermetadata Data Life Cycle Reproducibility Data management plan -
Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2