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Standard database or policy: Integrated resource of prot...  or NCBI Gene 


Pathway and Network Analysis 2014 Module 6 - Gene Function Prediction

Functional association networks and gene function prediction Homology based prediction Guilt-by-association: GeneMANIA

Keywords: Functional association networks, Gene function prediction, Genemania

Pathway and Network Analysis 2014 Module 6 - Gene Function Prediction http://tess.elixir-uk.org/materials/pathway-and-network-analysis-2014-module-6-gene-function-prediction Functional association networks and gene function prediction Homology based prediction Guilt-by-association: GeneMANIA Functional association networks, Gene function prediction, Genemania Biologists, Genomicists, Computer Scientists Graduate Students Post-Doctoral Fellows Researchers 2014-06-26 2017-10-09
Pathway and Network Analysis 2014 Module 3 - Gene Regulation Analysis

Overview of transcription Data sources for regulatory data - Chromatin IP, DNA hypersensitivity, other chip data Basics of processing data Pattern discovery

Keywords: Pattern discovery, Transcriptional regulation

Pathway and Network Analysis 2014 Module 3 - Gene Regulation Analysis http://tess.elixir-uk.org/materials/pathway-and-network-analysis-2014-module-3-gene-regulation-analysis Overview of transcription Data sources for regulatory data - Chromatin IP, DNA hypersensitivity, other chip data Basics of processing data Pattern discovery Pattern discovery, Transcriptional regulation Biologists, Genomicists, Computer Scientists Graduate Students Post-Doctoral Fellows Researchers 2014-06-26 2017-10-09
Pathway and Network Analysis 2014 Module 1 - Introduction to Gene Lists

Gene list analysis overview: Workflow of concepts and tools from gene list to pathway analysis Where do gene lists come from? Working with gene function information

Keywords: Gene lists, Gene ontology

Pathway and Network Analysis 2014 Module 1 - Introduction to Gene Lists http://tess.elixir-uk.org/materials/pathway-and-network-analysis-2014-module-1-introduction-to-gene-lists Gene list analysis overview: Workflow of concepts and tools from gene list to pathway analysis Where do gene lists come from? Working with gene function information Gene lists, Gene ontology Biologists, Genomicists, Computer Scientists Graduate Students Post-Doctoral Fellows Researchers 2014-06-26 2017-10-09
Bioinformatics: Gene-protein-structure-function

This presentation examines the available in silico tools for protein structure and function prediction. It examines the major protein family databases (PROSITE, PRINTS, Pfam, etc.), and explores why tools like PSI-BLAST, while convenient and easy to use, may not always give optimal results. The...

Keywords: Expert systems, Genequiz, Protein family characterisation, Protein family databases, Protein sequence analysis, Psi blast

Bioinformatics: Gene-protein-structure-function http://tess.elixir-uk.org/materials/bioinformatics-gene-protein-structure-function This presentation examines the available in silico tools for protein structure and function prediction. It examines the major protein family databases (PROSITE, PRINTS, Pfam, etc.), and explores why tools like PSI-BLAST, while convenient and easy to use, may not always give optimal results. The presentation concludes with an analysis of 'expert' systems and integrated approaches (GeneQuiz, MAGPIE, InterPro, etc.), and dispels the commonly held notion that one database and/or one analysis tool is best. Expert systems, Genequiz, Protein family characterisation, Protein family databases, Protein sequence analysis, Psi blast beginner bioinformaticians biocurators postdoc postgrad 2013-07-12 2017-10-09
InterPro: An introduction

This presentation introduces the background to the InterPro database: what it is, where it came from, and what was the vision behind its creation. It examines in particular whether the database has evolved in line with its original vision, and asks whether the resource is still fit for purpose. 

Keywords: Integrated diagnostic tools, Protein family characterisation, Protein sequence analysis

InterPro: An introduction http://tess.elixir-uk.org/materials/interpro-an-introduction This presentation introduces the background to the InterPro database: what it is, where it came from, and what was the vision behind its creation. It examines in particular whether the database has evolved in line with its original vision, and asks whether the resource is still fit for purpose.  Integrated diagnostic tools, Protein family characterisation, Protein sequence analysis beginner bioinformaticians biocurators postdoc postgrad 2013-07-12 2017-10-09
InterPro: Quick tour

InterPro: Quick tour from http://www.ebi.ac.uk/training/online/course/interpro-quick-tour.

Keywords: Proteins

InterPro: Quick tour http://tess.elixir-uk.org/materials/interpro-quick-tour InterPro: Quick tour from http://www.ebi.ac.uk/training/online/course/interpro-quick-tour. Proteins 2016-06-14
InterPro: Functional and structural analysis of protein sequences

InterPro: Functional and structural analysis of protein sequences from http://www.ebi.ac.uk/training/online/course/interpro-functional-and-structural-analysis-protei.

Keywords: Proteins

InterPro: Functional and structural analysis of protein sequences http://tess.elixir-uk.org/materials/interpro-functional-and-structural-analysis-of-protein-sequences InterPro: Functional and structural analysis of protein sequences from http://www.ebi.ac.uk/training/online/course/interpro-functional-and-structural-analysis-protei. Proteins 2016-06-14