OpenRiskNet: Ontology Walkthrough and Workshop
Workshop of 1.5h where the eNanoMapper ontology and a few uses are discussed. The exercises walk the audience trough the principles, uses, and demonstrates how they can actively work with the ontology.
Scientific topics: Ontology and terminology, Toxicology
Resource type: Tutorial
OpenRiskNet: Ontology Walkthrough and Workshop
https://openrisknet.github.io/workshop/OntologyWorkshop/
http://tess.elixir-uk.org/materials/openrisknet-ontology-walkthrough-and-workshop
Workshop of 1.5h where the eNanoMapper ontology and a few uses are discussed. The exercises walk the audience trough the principles, uses, and demonstrates how they can actively work with the ontology.
Egon Willighagen
Ontology and terminology
Toxicology
Biologists
bioinformaticians
Chemists
Adding nanomaterial data
This tutorial describes how nanomaterial data can be added to an eNanoMapper server using a RDF format.
Scientific topics: Database management, Toxicology
Keywords: nanotoxicology, enanomapper, resource description framework, ontology
Resource type: Tutorial
Adding nanomaterial data
https://nanocommons.github.io/tutorials/enteringData/
http://tess.elixir-uk.org/materials/adding-nanomaterial-data
This tutorial describes how nanomaterial data can be added to an eNanoMapper server using a RDF format.
Egon Willighagen
Database management
Toxicology
nanotoxicology, enanomapper, resource description framework, ontology
programmers
data entering
STRING exercises
Hands-on exercises using the STRING, STITCH, and DISEASES databases through their respective web interfaces.
Scientific topics: Protein interactions, Molecular interactions, pathways and networks, Bioinformatics
STRING exercises
http://jensenlab.org/training/string/
http://tess.elixir-uk.org/materials/string-exercises
Hands-on exercises using the STRING, STITCH, and DISEASES databases through their respective web interfaces.
Lars Juhl Jensen
Protein interactions
Molecular interactions, pathways and networks
Bioinformatics
Bioinformaticians
Biologists
Cytoscape stringApp exercises
Hands-on exercises using the stringApp for Cytoscape to retrieve molecular networks from the STRING and STITCH databases.
Scientific topics: Data visualisation, Proteomics, Protein interactions, Molecular interactions, pathways and networks, Bioinformatics
Cytoscape stringApp exercises
http://jensenlab.org/training/stringapp/
http://tess.elixir-uk.org/materials/cytoscape-stringapp-exercises
Hands-on exercises using the stringApp for Cytoscape to retrieve molecular networks from the STRING and STITCH databases.
Lars Juhl Jensen
Nadezhda T. Doncheva
Helen V. Cook
John "Scooter" Morris
Data visualisation
Proteomics
Protein interactions
Molecular interactions, pathways and networks
Bioinformatics
Bioinformaticians
Biologists
