Text-mining exercises
Hands-on exercises using a variety of text-mining tools and databases based on text mining, to interpret the results from microbiome studies.
Scientific topics: Data mining, Natural language processing, Metagenomics, Microbial ecology
Text-mining exercises
http://jensenlab.org/training/textmining/
http://tess.elixir-uk.org/materials/text-mining-exercises
Hands-on exercises using a variety of text-mining tools and databases based on text mining, to interpret the results from microbiome studies.
Evangelos Pafilis
Lars Juhl Jensen
Manimozhiyan Arumugam
Data mining
Natural language processing
Metagenomics
Microbial ecology
Bioinformaticians
Biologists
Galaxy for NGS analysis: A web-based platform for data intensive biological research
Galaxy is an open, web-based platform for data intensive biomedical research. It offers an accessible, reproducible and transparent computational workbench for the biologist. This workbench is very useful in automating repeated analysis steps in the form of workflows. The workbench interface is...
Scientific topics: Workflows, High-throughput sequencing, Nucleic acid sequence analysis, Bioinformatics
Keywords: John Innes Centre, JIC
Galaxy for NGS analysis: A web-based platform for data intensive biological research
http://training.scicomp.jic.ac.uk/docs/galaxycourse_book/index.html
http://tess.elixir-uk.org/materials/galaxy-for-ngs-analysis
Galaxy is an open, web-based platform for data intensive biomedical research. It offers an accessible, reproducible and transparent computational workbench for the biologist. This workbench is very useful in automating repeated analysis steps in the form of workflows. The workbench interface is simple and intuitive, supports collaboration and integrates data and analysis tools together in a single place.
Anmol J. Hemrom
Workflows
High-throughput sequencing
Nucleic acid sequence analysis
Bioinformatics
John Innes Centre, JIC
