ELN basics training materials
Electronic laboratory notebooks - basic intro in their use and functionality
Resource type: Presentation, hackathon
ELN basics training materials
https://zenodo.org/record/4518805#.YFCyPucxlhE
http://tess.elixir-uk.org/materials/eln-basics-training-materials
Electronic laboratory notebooks - basic intro in their use and functionality
Anastasios Papadiamantis, UoB
Martin Himly, PLUS
experimental nanoscientists
Sequence analysis - Mapping
Analyses of sequences
Questions of the tutorial:
- What two things are crucial for a correct mapping?
- What is BAM?
Objectives of the tutorial:
- You will learn what mapping is
- A genome browser is shown that helps you to understand your data
Sequence analysis - Mapping
http://galaxyproject.github.io/training-material/topics/sequence-analysis/tutorials/mapping/tutorial.html
http://tess.elixir-uk.org/materials/analysis-of-sequences-mapping
Analyses of sequences
Questions of the tutorial:
- What two things are crucial for a correct mapping?
- What is BAM?
Objectives of the tutorial:
- You will learn what mapping is
- A genome browser is shown that helps you to understand your data
joachimwolff
Sequence analysis - Quality Control
Analyses of sequences
Questions of the tutorial:
- How to control quality of NGS data?
- What are the quality parameters to check for each dataset?
- How to improve the quality of a sequence dataset?
Objectives of the tutorial:
- Manipulate FastQ files
- Control quality from a FastQ file
-...
Sequence analysis - Quality Control
http://galaxyproject.github.io/training-material/topics/sequence-analysis/tutorials/quality-control/tutorial.html
http://tess.elixir-uk.org/materials/analysis-of-sequences-quality-control
Analyses of sequences
Questions of the tutorial:
- How to control quality of NGS data?
- What are the quality parameters to check for each dataset?
- How to improve the quality of a sequence dataset?
Objectives of the tutorial:
- Manipulate FastQ files
- Control quality from a FastQ file
- Use FastQC tool
- Understand FastQC output
- Use tools for quality correction
bebatut
