Related resources: recorded presentation on in... or Sequence analysis dataset
Under the subtitle “Getting into using ELNs for experimental and computational workflows”, participants learned how to establish a workflow using Scinote-based electronic lab notebooks. It started with an introduction to the Scinote inventory and continues with hands-on instructions on how to...
Resource type: Presentation, hackathon
Analyses of sequences
Questions of the tutorial:
- How to analyze RAD sequencing data for a genetic map study?
Objectives of the tutorial:
- SNP calling from RAD sequencing data
- Find and correct haplotypes
- Create input files for genetic map building software
Resource type: Tutorial
Analyses of sequences
Questions of the tutorial:
- How to analyze RAD sequencing data without a reference genome for a population genomics study?
Objectives of the tutorial:
- Analysis of RAD sequencing data without a reference genome
- SNP calling from RAD sequencing data
- Calculate...
Resource type: Tutorial
Analyses of sequences
Questions of the tutorial:
- How to analyze RAD sequencing data using a reference genome for a population genomics study?
Objectives of the tutorial:
- Analysis of RAD sequencing data using a reference genome
- SNP calling from RAD sequencing data
- Calculate population...
Resource type: Tutorial
Analyses of sequences
Questions of the tutorial:
- What two things are crucial for a correct mapping?
- What is BAM?
Objectives of the tutorial:
- You will learn what mapping is
- A genome browser is shown that helps you to understand your data
Resource type: Tutorial
Analyses of sequences
Questions of the tutorial:
- How to control quality of NGS data?
- What are the quality parameters to check for each dataset?
- How to improve the quality of a sequence dataset?
Objectives of the tutorial:
- Manipulate FastQ files
- Control quality from a FastQ file -...
Resource type: Tutorial