Galaxy Server administration - Connecting Galaxy to a compute cluster
Resources related to configuration and maintenance of Galaxy servers
Questions of the tutorial:
- How to connect Galaxy to a compute cluster?
- How can I configure job dependent resources, like cores, memory for my DRM?
Objectives of the tutorial:
- Be familiar with the basics of installing,...
Galaxy Server administration - Connecting Galaxy to a compute cluster
http://galaxyproject.github.io/training-material/topics/admin/tutorials/connect-to-compute-cluster/tutorial.html
http://tess.elixir-uk.org/materials/galaxy-server-administration-connecting-galaxy-to-a-compute-cluster
Resources related to configuration and maintenance of Galaxy servers
Questions of the tutorial:
- How to connect Galaxy to a compute cluster?
- How can I configure job dependent resources, like cores, memory for my DRM?
Objectives of the tutorial:
- Be familiar with the basics of installing, configuring, and using Slurm
- Understand all components of the Galaxy job running stack
- Understand how the `job_conf.xml` file controls Galaxy's jobs subsystem
- Have a strong understanding of Galaxy job destinations
- Know how to map tools to job destinations
- Be able to use the dynamic job runner to make arbitrary destination mappings
- Understand the job resource selector config and dynamic rule creation
natefoo
bgruening
Introduction to Galaxy Analyses - From peaks to genes
Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.
Questions of the tutorial:
- How to use Galaxy?
- How to get...
Introduction to Galaxy Analyses - From peaks to genes
http://galaxyproject.github.io/training-material/topics/introduction/tutorials/galaxy-intro-peaks2genes/tutorial.html
http://tess.elixir-uk.org/materials/galaxy-introduction-from-peaks-to-genes
Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.
Questions of the tutorial:
- How to use Galaxy?
- How to get from peak regions to a list of gene names?
Objectives of the tutorial:
- Familiarize yourself with the basics of Galaxy
- Learn how to obtain data from external sources
- Learn how to run tools
- Learn how histories work
- Learn how to create a workflow
- Learn how to share your work
pajanne
blankclemens
bebatut
bgruening
nsoranzo
dyusuf
