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3 materials found

Related resources: COBRA Toolbox  or Metagenomics dataset 


Constraint-based reconstruction and analysis toolbox tutorials

A suite of >50 tutorials to enable beginners, as well as intermediate and advanced users to practice a wide variety of COBRA methods.

Keywords: Biomodelling

Resource type: Tutorial

Constraint-based reconstruction and analysis toolbox tutorials http://tess.elixir-uk.org/materials/constraint-based-reconstruction-and-analysis-toolbox-tutorials A suite of >50 tutorials to enable beginners, as well as intermediate and advanced users to practice a wide variety of COBRA methods. Biomodelling Biologists, Genomicists, Computer Scientists
Metagenomics - Analyses of metagenomics data - The global picture

Metagenomics is a discipline that enables the genomic study of uncultured microorganisms Questions of the tutorial: - How to analyze metagenomics data? - What information can be extracted of metagenomics data? - What is the difference between amplicon and shotgun data? - What are the difference...

Resource type: Tutorial

Metagenomics - Analyses of metagenomics data - The global picture http://tess.elixir-uk.org/materials/metagenomics-analyses-of-metagenomics-data-the-global-picture Metagenomics is a discipline that enables the genomic study of uncultured microorganisms Questions of the tutorial: - How to analyze metagenomics data? - What information can be extracted of metagenomics data? - What is the difference between amplicon and shotgun data? - What are the difference in the analyses of amplicon and shotgun data? Objectives of the tutorial: - Choosing the best approach to analyze metagenomics data - Selection of tools to analyze amplicon data or shotgun data - Visualisation of a community structure
Metagenomics - 16S Microbial Analysis with Mothur

Metagenomics is a discipline that enables the genomic study of uncultured microorganisms Questions of the tutorial: - What is the effect of normal variation in the gut microbiome on host health? Objectives of the tutorial: - Analyze of 16S rRNA sequencing data using the Mothur toolsuite in...

Resource type: Tutorial

Metagenomics - 16S Microbial Analysis with Mothur http://tess.elixir-uk.org/materials/metagenomics-16s-microbial-analysis-with-mothur Metagenomics is a discipline that enables the genomic study of uncultured microorganisms Questions of the tutorial: - What is the effect of normal variation in the gut microbiome on host health? Objectives of the tutorial: - Analyze of 16S rRNA sequencing data using the Mothur toolsuite in Galaxy