Operations: RNA-Seq analysis or Filtering
Scientific topics: Workflows
Operations: RNA-Seq analysis
Keywords: cwl, commonwl, sciworkflows, workflows
Resource type: Carpentries style curriculum
This is a tutorial to guide the analysis of RNAseq dataset using footprint based tools such as DOROTHEA, PROGENY and CARNIVAL
Scientific topics: RNA-Seq, Omics, Gene expression, Molecular interactions, pathways and networks
Operations: RNA-Seq analysis, Network analysis
Keywords: HPC, Signaling, RNAseq, transcriptomics
Resource type: Tutorial
Datanator is an integrated database of genomic and biochemical data designed to help investigators find data about specific molecules and reactions in specific organisms and specific environments for meta-analyses and mechanistic models. Datanator currently includes metabolite concentrations, RNA...
Scientific topics: Omics, Bioinformatics, Systems biology, Cell biology, Molecular biology
Operations: Filtering, Query and retrieval
Keywords: genomics, Proteomics, transcriptomics, Metabolomics, reaction kinetics, Kinetic modeling, meta analysis
Resource type: Tutorial