IFB Shiny training
Shiny package training (in french)
Keywords: R-programming, Reproducible Science
IFB Shiny training
https://ifb-elixirfr.github.io/IFB_Shiny_training/
http://tess.elixir-uk.org/materials/ifb-shiny-training
Shiny package training (in french)
Frederic Schütz
Cédric Midoux
Christophe Malabat
Hélène Chiapello
Jacques van Helden
R-programming, Reproducible Science
bioinformaticians
statisticians
Initiation to R programming and descriptive statistics
On-line course support for the initiation to R programming and descriptive statistics given to PhD students at Institut Pasteur (Paris, France).
Keywords: R-programming, Descriptive statistics, Statistics, Bioinformatics
Initiation to R programming and descriptive statistics
https://hub-courses.pages.pasteur.fr/R_pasteur_phd/index.html
http://tess.elixir-uk.org/materials/initiation-to-r-programming-and-descriptive-statistics
On-line course support for the initiation to R programming and descriptive statistics given to PhD students at Institut Pasteur (Paris, France).
Institut Pasteur, Bioinformatics and Biostatistics Hub
Blaise Li
Étienne Kornobis
Sébastien Mella
Vincent Guillemot
R-programming, Descriptive statistics, Statistics, Bioinformatics
PhD students
Post-Doctoral Fellows
Biologists
Data processing with R tidyverse
R is a powerful language for data science in many disciplines of research with a steep learning curve. The tidyverse group of packages provide a dialect that greatly simplifies:
* data importing
* cleaning
* processing
* visualization as well as providing reproducible workflows using...
Keywords: R-programming
Resource type: course materials
Data processing with R tidyverse
https://rworkshop.uni.lu/
http://tess.elixir-uk.org/materials/data-processing-with-r-tidyverse
R is a powerful language for data science in many disciplines of research with a steep learning curve. The tidyverse group of packages provide a dialect that greatly simplifies:
* data importing
* cleaning
* processing
* visualization as well as providing reproducible workflows using pipelines (`%>%`)
Adopt Hadley Wickham, Chief Scientist at RStudio, philosophy: take each step of data science and replace many intricacies of R with clear, consistent and easy to learn syntax. RStudio will be the software to use since it eases package management, scripting, plotting and data handling.
Aurélien Ginolhac
Roland Krause
Eric Koncina
R-programming
Researchers
Bioinformática con Ñ
"Bioinformática con Ñ" is a project born in 2013 aimed to provide specialized educational bibliography on Bioinformatics for Spanish speakers. The first release, published in 2014 and edited by Álvaro Sebastián and Alberto Pascual-García, consists on more than 500 pages where the following...
Scientific topics: Systems biology, Bioinformatics
Keywords: introduction to bioinformatics, structural biology, biomolecular databases, Systems biology, phylogenetics, Programming, Sequence Analysis, DNA RNA, Virtual Screening, molecular evolution, molecular dynamics, Molecular docking, normal modes analysis, Proteins, protein folding, protein structure alignment, chromatin structure, intrinsically disordered proteins, data minning, R-programming, parallel computing, bibliography management
Resource type: Book
Bioinformática con Ñ
https://zenodo.org/communities/bioinfconn
http://tess.elixir-uk.org/materials/bioinformatica-con-n
"Bioinformática con Ñ" is a project born in 2013 aimed to provide specialized educational bibliography on Bioinformatics for Spanish speakers. The first release, published in 2014 and edited by Álvaro Sebastián and Alberto Pascual-García, consists on more than 500 pages where the following matters are covered: biomedical databases, sequence analysis, phylogeny and evolution, structural biology, including diverse topics such as docking, virtual screening or molecular dynamics, statistics and R, systems biology, programming skills, data mining, parallel computation, bibliography management and science article writing.
F. Abascal, J. Aguirre, E. Andrés-León, D. Bajic, D. Baú, J. A. Bueren-Calabuig, Á. Cortés-Cabrera, I. Dotu, J. M. Fernández, H. G. D. Santos, B. Garcı́a-Jiménez, R. Guantes, I. Irisarri, N. Jiménez-Lozano, J. Klett, R. Méndez, A. Morreale, A. Pascual-Garcı́a, A. Perona, A. Sebastian, M. Stich, S. Tarazona, I. Yruela y R. Zardoya
Portada: Enrique Sahagún
Systems biology
Bioinformatics
introduction to bioinformatics, structural biology, biomolecular databases, Systems biology, phylogenetics, Programming, Sequence Analysis, DNA RNA, Virtual Screening, molecular evolution, molecular dynamics, Molecular docking, normal modes analysis, Proteins, protein folding, protein structure alignment, chromatin structure, intrinsically disordered proteins, data minning, R-programming, parallel computing, bibliography management
Anyone interested in bioinformatics
Summer School 2018 TrainMalta: Epigenomics. Introduction to Unix and R
An overview of Unix and R for bioinformatics
Keywords: Unix, R-programming
Resource type: Training materials
Summer School 2018 TrainMalta: Epigenomics. Introduction to Unix and R
https://github.com/semacu/20180726_TrainMalta_Unix_R
http://tess.elixir-uk.org/materials/summer-school-2018-trainmalta-epigenomics-introduction-to-unix-and-r
An overview of Unix and R for bioinformatics
Sergio Martínez Cuesta
Luigi Grassi
Unix, R-programming
PhD students
Life Science Researchers
Data visualisation with R and ggplot2
This course provides a short beginners introduction to data visualisation using the R programming language and software environment for statistical computing and graphics. Sergio will demonstrate basic examples on how to import data, perform different types of plots and export graphics using R...
Keywords: R-programming
Resource type: course materials
Data visualisation with R and ggplot2
https://github.com/semacu/20180531_DataVisualisationRggplot2_Wolfson_Cambridge/
http://tess.elixir-uk.org/materials/data-visualisation-with-r-and-ggplot2
This course provides a short beginners introduction to data visualisation using the R programming language and software environment for statistical computing and graphics. Sergio will demonstrate basic examples on how to import data, perform different types of plots and export graphics using R standard functions and the library ggplot2. Everybody is welcome; if you would like to follow along with your laptop, please bring R and RStudio downloaded and installed before the session.
Sergio Martínez Cuesta
R-programming
PhD students
Researchers
Introduction to R
This course provides a short beginners introduction to the R programming language and software environment for statistical computing and graphics. Sergio will demonstrate basic examples on how to input, explore, plot and output data in R. Everybody is welcome, if you would like to follow along...
Keywords: R-programming
Resource type: course materials
Introduction to R
https://github.com/semacu/20180315_IntroductionToR_Wolfson_Cambridge/blob/master/README.Rmd
http://tess.elixir-uk.org/materials/introduction-to-r-327a9c78-9b0c-4133-adfc-180c02c93023
This course provides a short beginners introduction to the R programming language and software environment for statistical computing and graphics. Sergio will demonstrate basic examples on how to input, explore, plot and output data in R. Everybody is welcome, if you would like to follow along with your laptop, please bring R and RStudio downloaded and installed before the session.
Sergio Martínez Cuesta
R-programming
PhD students
Researchers