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17 materials found

Keywords: Shell  or metagenomics 


Hands-on for '16S Microbial Analysis with mothur (extended)' tutorial

The questions this addresses are:
- What is the effect of normal variation in the gut microbiome on host health?

\nThe objectives are:
- Analyze of 16S rRNA sequencing data using the mothur toolsuite in Galaxy
- Using a mock community to assess the error rate of your sequencing experiment
-...

Scientific topics: Metagenomics

Keywords: metagenomics

Resource type: hands-on tutorial

Hands-on for 'Analyses of metagenomics data - The global picture' tutorial

The questions this addresses are:
- How to analyze metagenomics data?
- What information can be extracted of metagenomics data?
- What is the difference between amplicon and shotgun data?
- What are the difference in the analyses of amplicon and shotgun data?

\nThe objectives are:
-...

Scientific topics: Metagenomics

Keywords: metagenomics

Resource type: hands-on tutorial

Hands-on for '16S Microbial Analysis with mothur (short)' tutorial

The questions this addresses are:
- What is the effect of normal variation in the gut microbiome on host health?

\nThe objectives are:
- Analyze of 16S rRNA sequencing data using the mothur toolsuite in Galaxy
- Using a mock community to assess the error rate of your sequencing experiment
-...

Scientific topics: Metagenomics

Keywords: metagenomics

Resource type: hands-on tutorial

Slides for 'Introduction to metatranscriptomics' tutorial

The questions this addresses are:
- How to analyze metatranscriptomics data?
- What information can be extracted of metatranscriptomics data?
- How to assign taxa and function to the identified sequences?

Scientific topics: Metagenomics

Keywords: metagenomics

Resource type: slides