Keywords: Shell or Gene Expression
This workshop will present how to perform analysis of RNA sequencing data following the tidy data paradigm, using the tidybulk, tidyHeatmap and tidyverse packages.
Scientific topics: RNA-Seq
Keywords: Differential Expression, Gene Expression, RNA-seq, Transcriptomics
Resource type: Tutorial
Functional genomics (III): Submitting your data and functional genomics databases from http://www.ebi.ac.uk/training/online/course/functional-genomics-iii-submitting-your-data-and-f.
Keywords: Gene Expression
Functional genomics (I): Introduction and designing experiments from http://www.ebi.ac.uk/training/online/course/functional-genomics-i-introduction-and-designing-e.
Keywords: Gene Expression
ArrayExpress: Discover functional genomics data quickly and easily from http://www.ebi.ac.uk/training/online/course/arrayexpress-discover-functional-genomics-data-qui.
Keywords: Gene Expression
Filename Expansion from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/05-expansion.md.
Keywords: Shell
Keywords: Shell
Instructor's Guide from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/guide.md.
Keywords: Shell
Keywords: Shell
Creating Things from https://github.com/swcarpentry/bc/tree/gh-pages/novice/shell/02-create.md.
Keywords: Shell
Shell Scripts from https://github.com/swcarpentry/bc/tree/gh-pages/novice/shell/05-script.md.
Keywords: Shell
Pipes and Filters from https://github.com/swcarpentry/bc/tree/gh-pages/novice/shell/03-pipefilter.md.
Keywords: Shell
Introducing the Shell from https://github.com/swcarpentry/bc/tree/gh-pages/novice/shell/00-intro.md.
Keywords: Shell
Finding Things from https://github.com/swcarpentry/bc/tree/gh-pages/novice/shell/06-find.md.
Keywords: Shell
Files and Directories from https://github.com/swcarpentry/bc/tree/gh-pages/novice/shell/01-filedir.md.
Keywords: Shell
Keywords: Shell
Working Remotely from https://github.com/swcarpentry/bc/tree/gh-pages/intermediate/shell/02-ssh.md.
Keywords: Shell
Functional genomics: An introduction to EMBL-EBI resources from http://www.ebi.ac.uk/training/online/course/functional-genomics-introduction-embl-ebi-resource-1.
Keywords: Gene Expression
Expression Atlas: Quick tour from http://www.ebi.ac.uk/training/online/course/expression-atlas-quick-tour-0.
Keywords: Gene Expression
EMBO Practical Course on Analysis of High-Throughput Sequencing Data from http://www.ebi.ac.uk/training/online/course/embo-practical-course-analysis-high-throughput-seq.
Keywords: Gene Expression
EBI: Next Generation Sequencing Practical Course from http://www.ebi.ac.uk/training/online/course/ebi-next-generation-sequencing-practical-course.
Scientific topics: Sequencing
Keywords: DNA RNA, Gene Expression
diXa data warehouse: Exploring data from toxicogenomics studies from http://www.ebi.ac.uk/training/online/course/dixa-data-warehouse-exploring-data-toxicogenomics.
Keywords: Gene Expression, Ontologies, Chemical biology
BioSamples: Quick tour from http://www.ebi.ac.uk/training/online/course/biosamples-quick-tour.
Keywords: DNA RNA, Gene Expression, Ontologies, Proteins
BioSamples Database RDF: webinar from http://www.ebi.ac.uk/training/online/course/biosamples-database-rdf-webinar.
Keywords: DNA RNA, Gene Expression, Ontologies, Proteins
This quick tour provides an overview of EMBL-EBI’s functional genomics database ArrayExpress.
This course was updated in December 2015.
An undergraduate-level understanding of biology is an advantage. You may wish to have a look at our Functional genomics: An introduction to EMBL-EBI...
Scientific topics: Gene expression, Gene expression and microarray, Functional genomics
Keywords: Gene Expression