Introductory image processing on biological images using python.
A jupyter notebook python practical designed to give students a introduction to opening and processing image files derived from biological samples.
Resource type: Jupyter notebook, PDF
Introductory image processing on biological images using python.
https://github.com/dwaithe/model-training/
http://tess.elixir-uk.org/materials/introductory-image-processing-on-biological-images-using-python
A jupyter notebook python practical designed to give students a introduction to opening and processing image files derived from biological samples.
Dominic Waithe
Anatole Chessel
Volker Baecker
Bioimage Analysts
Image Analysts
Computer Vision scientists
bioinformaticians
computational scientists
Biophysicists
Biologists
Microscopists
Python for Biologists
PhD students
Cellular Image Data
Peter Sorger (http://sorger.med.harvard.edu/) and Bang Wong (http://bang.clearscience.info/) talk about the challenges of visualising large sets of multidimensional data (e.g. single cell imaging, dose-response assays, multiplex biochemistry etc.).This video was filmed and distributed with...
Keywords: Cells and Organisms
Resource type: Video
Cellular Image Data
https://bivi.co/presentation/cellular-image-data
http://tess.elixir-uk.org/materials/cellular-image-data
Peter Sorger (http://sorger.med.harvard.edu/) and Bang Wong (http://bang.clearscience.info/) talk about the challenges of visualising large sets of multidimensional data (e.g. single cell imaging, dose-response assays, multiplex biochemistry etc.).This video was filmed and distributed with permission under a Creative Commons license.
Created at: VIZBI 2013.
Bang Wong
Cells and Organisms
2017-01-31
Art and Science: A partnership catalyzing discovery in biomedicine
A 3rd BiVi 2017 Keynote Presentation by Bang Wong, Broad Institute of MIT & Harvard and Department of Art as Applied to Medicine, Johns Hopkins University School of MedicineChaired by: Geoff BartonThe data generated by the biomedical research community hold tremendous potential to inform our...
Scientific topics: Phylogenetics, Pathway or network
Keywords: Anatomy Physiology and Atlases, Cells and Organisms, Genome, Molecular, Pathway, Phylogenetics, Populations, Communication, Information visualisation
Resource type: Video
Art and Science: A partnership catalyzing discovery in biomedicine
https://bivi.co/presentation/art-and-science-partnership-catalyzing-discovery-biomedicine
http://tess.elixir-uk.org/materials/art-and-science-a-partnership-catalyzing-discovery-in-biomedicine
A 3rd BiVi 2017 Keynote Presentation by Bang Wong, Broad Institute of MIT & Harvard and Department of Art as Applied to Medicine, Johns Hopkins University School of MedicineChaired by: Geoff BartonThe data generated by the biomedical research community hold tremendous potential to inform our understanding and treatment of disease. The challenge is to ensure that technical and non-technical researchers can access, use and learn from this wealth of data and analytical resources. Bang will present examples of solutions developed at the Broad Institute that draw on art and design to enable scientific discovery.Bang Wong is the creative director of the Broad Institute of MIT & Harvard and an adjunct assistant professor in the Department of Art as Applied to Medicine at the Johns Hopkins University School of Medicine. His work focuses on the design and development of computation-visualization tools to meet the analytical challenges of research data. He leads the data visualization initiative at the Broad and is the founding author of Points of View published by Nature Methods, a series of articles that focus on the fundamental aspects of data presentation in science.
Created at: 3rd BiVi Annual Meeting (2017).
Bang Wong
Phylogenetics
Pathway or network
Anatomy Physiology and Atlases, Cells and Organisms, Genome, Molecular, Pathway, Phylogenetics, Populations, Communication, Information visualisation
2017-05-12
