PPB18 - Programming in Python for Biologists (2018)
Training Material that covers the basic concepts of Python, such as calculation, organization of data, reading and writing files, program logic and writing larger programs. All the examples and exercises focus on solving biological problems.
Operations: Data handling, Data retrieval
Keywords: Bioinformatics, Biology, Biological databases
Resource type: Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
https://gtpb.github.io/PPB18/
http://tess.elixir-uk.org/materials/ppb18-programming-in-python-for-biologists-2018
Training Material that covers the basic concepts of Python, such as calculation, organization of data, reading and writing files, program logic and writing larger programs. All the examples and exercises focus on solving biological problems.
The Gulbenkian Training Programme in Bioinformatics
Allegra Via
Vincenza Colonna
David Philip Judge
Bioinformatics, Biology, Biological databases
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
SeqMonk: Using visualisation to identify errors and biases in genome scale sequencing data
The increasing scale and complexity of genome scale studies has led to more widespread use of unsupervised analysis pipelines and reduced inspection and sanity checking of the underlying data. Here we will illustrate how the use of interactive visualisation tools along with an explorative...
Keywords: Genome
Resource type: Video
SeqMonk: Using visualisation to identify errors and biases in genome scale sequencing data
https://bivi.co/presentation/seqmonk-using-visualisation-identify-errors-and-biases-genome-scale-sequencing-data
http://tess.elixir-uk.org/materials/seqmonk-using-visualisation-to-identify-errors-and-biases-in-genome-scale-sequencing-data
The increasing scale and complexity of genome scale studies has led to more widespread use of unsupervised analysis pipelines and reduced inspection and sanity checking of the underlying data. Here we will illustrate how the use of interactive visualisation tools along with an explorative approach to analysis can identify problems which would otherwise go undetected by standard pipelines.
Created at: 3rd BiVi Annual Meeting (2017).
Dr. Simon Andrews
Genome
2017-05-15
