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21 materials found

Content provider: CINECA PROJECT  or Centre for Digital Life Norway 

Slides DMP writing workshop for Researchers in Bergen online 21.04. - 22.04.2021

Slides DMP writing workshop for Researchers in Bergen online 21.04. - 22.04.2021

Scientific topics: Data management

Operations: Deposition, Data handling, Data retrieval

Keywords: Data management plan, data management

Resource type: Slides

Slides DMP writing workshop for Researchers in Bergen online 21.04. - 22.04.2021 http://tess.elixir-uk.org/materials/slides-dmp-writing-workshop-for-researchers-in-bergen-online-21-04-22-04-2021 Slides DMP writing workshop for Researchers in Bergen online 21.04. - 22.04.2021 Data management Data management plan, data management All postgraduates
Slides from DMP writing workshop, for Researchers in Aas, online 09.03.- 10.03.2021

Slides from DMP writing workshop, for Researchers in Aas, online 09.03.- 10.03.2021

Scientific topics: Data management

Operations: Data retrieval, Data handling, Deposition

Keywords: Data management plan, data management

Resource type: Slides

Slides from DMP writing workshop, for Researchers in Aas, online 09.03.- 10.03.2021 http://tess.elixir-uk.org/materials/slides-from-dmp-writing-workshop-for-researchers-in-aas-online-09-03-10-03-2021 Slides from DMP writing workshop, for Researchers in Aas, online 09.03.- 10.03.2021 Data management Data management plan, data management All postgraduates
GA4GH Passports and ELIXIR AAI

The target group of the training is developers and administrators of services that want to make use of GA4GH Passports to authenticate a user and authorise them to call an API.

Keywords: AAI , GA4GH, Passports, Auhtorisation

Resource type: Training materials, Video

GA4GH Passports and ELIXIR AAI http://tess.elixir-uk.org/materials/ga4gh-passports-and-elixir-aai The target group of the training is developers and administrators of services that want to make use of GA4GH Passports to authenticate a user and authorise them to call an API. Stefan Negru Teemu Kataja AAI , GA4GH, Passports, Auhtorisation software developers, bioinformaticians
Data Management Planning workshop for new Life Science Projects

Slides from Data Management Planning online workshop for Life Science Projects for researchers

Scientific topics: Data management

Operations: Data retrieval, Data handling, Deposition

Keywords: data management plan, NeLS, TSD, metadata, sensitive, data publication, data protection, storage, identifiers, DMP, licensing, Compliance, data life cycle - collect, data life cycle - reuse, data life cycle - analyse, data life cycle - process, data life cycle - preserve, data life cycle - share, data life cycle - plan

Resource type: Slides

Data Management Planning workshop for new Life Science Projects http://tess.elixir-uk.org/materials/data-management-planning-workshop-for-new-life-science-projects Slides from Data Management Planning online workshop for Life Science Projects for researchers Nazeefa Fatima Espen Åberg Eivind Coward Federico Bianchini Data management data management plan, NeLS, TSD, metadata, sensitive, data publication, data protection, storage, identifiers, DMP, licensing, Compliance, data life cycle - collect, data life cycle - reuse, data life cycle - analyse, data life cycle - process, data life cycle - preserve, data life cycle - share, data life cycle - plan Professor PhD candidate Postdoctoral researcher Researcher data steward / data manager data manager Senior scientist/ Principal investigator Life sciences
CINECA discovery service catalog

Description and demonstration of the CINECA service catalog

Keywords: Cohort data, Standards, federated data analysis, Beacon queries

Resource type: Series of videos

CINECA discovery service catalog http://tess.elixir-uk.org/materials/cineca-discovery-service-catalog Description and demonstration of the CINECA service catalog Cohort data, Standards, federated data analysis, Beacon queries
A common framework for designing portable federated pipelines

This video describes a common framework for designing portable federated pipelines

Scientific topics: Data architecture, analysis and design

Keywords: data access, federated data analysis

Resource type: Video

A common framework for designing portable federated pipelines http://tess.elixir-uk.org/materials/a-common-framework-for-designing-portable-federated-pipelines This video describes a common framework for designing portable federated pipelines Alvaro Gonzalez Data architecture, analysis and design data access, federated data analysis
FAIR software tools

CINECA webinar discussing the importance of the FAIR principles for software tools used in research

Scientific topics: Software engineering

Keywords: FAIR, software tools, Software

Resource type: Video

FAIR software tools http://tess.elixir-uk.org/materials/fair-software-tools CINECA webinar discussing the importance of the FAIR principles for software tools used in research Software engineering FAIR, software tools, Software
Making cohort data FAIR

CINECA webinar about how to make data from cohort studies FAIR

Scientific topics: Data management, Data integration and warehousing

Keywords: FAIR data, Cohort data, Ontologies, Standards

Resource type: Video

Making cohort data FAIR http://tess.elixir-uk.org/materials/making-cohort-data-fair CINECA webinar about how to make data from cohort studies FAIR Data management Data integration and warehousing FAIR data, Cohort data, Ontologies, Standards
Introduction to FAIR principles - Open science through FAIR health data networks: dream or reality?

CINECA webinar about the basics of FAIR health data.

Scientific topics: Data management

Keywords: FAIR data, Health data, Open science

Resource type: Video

Introduction to FAIR principles - Open science through FAIR health data networks: dream or reality? http://tess.elixir-uk.org/materials/introduction-to-fair-principles-open-science-through-fair-health-data-networks-dream-or-reality CINECA webinar about the basics of FAIR health data. Data management FAIR data, Health data, Open science
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects

CINECA webinar discussing when to bring compute to the data

Scientific topics: Data architecture, analysis and design

Keywords: Cloud computing, Data analysis, Standards, Translational research

Resource type: Video

Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects http://tess.elixir-uk.org/materials/data-gravity-in-the-life-sciences-lessons-learned-from-the-hca-and-other-federated-data-projects CINECA webinar discussing when to bring compute to the data Data architecture, analysis and design Cloud computing, Data analysis, Standards, Translational research
Annotating data using next generation biobanking ontology (NGBO)

This video explains why we need data standardization and how to annotate data using next generation biobanking ontology (NGBO).

Scientific topics: Ontology and terminology, Data integration and warehousing

Keywords: Standards, Ontologies, Data Integration, data harmonization, Standardised vocabulary

Resource type: Video

Annotating data using next generation biobanking ontology (NGBO) http://tess.elixir-uk.org/materials/annotating-data-using-next-generation-biobanking-ontology-ngbo This video explains why we need data standardization and how to annotate data using next generation biobanking ontology (NGBO). Ontology and terminology Data integration and warehousing Standards, Ontologies, Data Integration, data harmonization, Standardised vocabulary
Applying data standards to the harmonization of COVID-19 datasets from different sources

This video describes how public health genomics has played a key role in international responses to the COVID-19 pandemic, and how data standards are being used to harmonize data across jurisdictions for Canadian COVID-19 surveillance and outbreak investigations.

Scientific topics: Data integration and warehousing

Keywords: Data integration, Standards, Standardised vocabulary, data harmonization, Ontologies

Resource type: Video

Applying data standards to the harmonization of COVID-19 datasets from different sources http://tess.elixir-uk.org/materials/applying-data-standards-to-the-harmonization-of-covid-19-datasets-from-different-sources This video describes how public health genomics has played a key role in international responses to the COVID-19 pandemic, and how data standards are being used to harmonize data across jurisdictions for Canadian COVID-19 surveillance and outbreak investigations. Data integration and warehousing Data integration, Standards, Standardised vocabulary, data harmonization, Ontologies Anyone interested in data standardization and/or the ontology approach (i.e. public, end users).
Useful ontologies for harmonizing cohort data

This video describes a community of practice for interoperable ontology building called the OBO Foundry, and highlights a number of well curated and maintained ontologies that are useful for annotating cohort data.

Scientific topics: Ontology and terminology, Data management, Data integration and warehousing

Keywords: Ontologies, Cohort data, data annotation

Resource type: Video

Useful ontologies for harmonizing cohort data http://tess.elixir-uk.org/materials/useful-ontologies-for-harmonizing-cohort-data This video describes a community of practice for interoperable ontology building called the OBO Foundry, and highlights a number of well curated and maintained ontologies that are useful for annotating cohort data. Ontology and terminology Data management Data integration and warehousing Ontologies, Cohort data, data annotation Anyone interested in data standardization and/or the ontology approach (i.e. public, end users).
Slides from Data Management Planning Workshop

Slides from Data Management Planning online workshop for Life Science Projects for researchers at UiO 2020-12-11

Scientific topics: Data management

Operations: Data handling, Data retrieval, Deposition

Keywords: Data management plan, data management

Resource type: Slides

Slides from Data Management Planning Workshop http://tess.elixir-uk.org/materials/slides-from-data-management-planning-workshop-96479971-67e0-47d6-a5de-b2b8f4dbea62 Slides from Data Management Planning online workshop for Life Science Projects for researchers at UiO 2020-12-11 Data management Data management plan, data management PhD students Professors Professors All postgraduates
Slides from Data Management Planning Workshop

Slides from Data Management Planning online workshop for Life Science Projects for researchers at NTNU 2020-12-01

Scientific topics: Data management

Operations: Data handling, Data retrieval, Deposition

Keywords: Data management plan, data management

Resource type: Slides

Slides from Data Management Planning Workshop http://tess.elixir-uk.org/materials/slides-from-data-management-planning-workshop-08010d67-d503-436b-95b9-6fe29f47ebba Slides from Data Management Planning online workshop for Life Science Projects for researchers at NTNU 2020-12-01 Data management Data management plan, data management PhD students Professors Post Docs All postgraduates
Status Update Code of Conduct: Teaming up & Talking about it

CINECA webinar about the code of conduct for the sector of health research according to Art. 40 GDPR

Keywords: GDPR, Healthcare research, data harmonization

Resource type: Video

Status Update Code of Conduct: Teaming up & Talking about it http://tess.elixir-uk.org/materials/status-update-code-of-conduct-teaming-up-talking-about-it CINECA webinar about the code of conduct for the sector of health research according to Art. 40 GDPR GDPR, Healthcare research, data harmonization
Annotating data using ontologies

This video highlights examples of tools and ontologies which can be used for annotating health data, and how ontologies help to support data ecosystems.

Scientific topics: Ontology and terminology, Data integration and warehousing, Data management

Keywords: Ontologies, Annotation, Data integration

Resource type: Video

Annotating data using ontologies http://tess.elixir-uk.org/materials/annotating-data-using-ontologies This video highlights examples of tools and ontologies which can be used for annotating health data, and how ontologies help to support data ecosystems. Ontology and terminology Data integration and warehousing Data management Ontologies, Annotation, Data integration
Solutions for overcoming cohort data integration challenges using ontology: an introduction

Ontologies are collections of well-defined, hierarchical, controlled vocabulary, linked by logical relationships. This video introduces the concept and benefits of implementing ontologies for solving data integration issues when data is generated by different research groups.

Scientific topics: Data management, Data integration and warehousing, Ontology and terminology

Keywords: Ontologies, Data integration, Annotation

Resource type: Video

Solutions for overcoming cohort data integration challenges using ontology: an introduction http://tess.elixir-uk.org/materials/solutions-for-overcoming-cohort-data-integration-challenges-using-ontology-an-introduction Ontologies are collections of well-defined, hierarchical, controlled vocabulary, linked by logical relationships. This video introduces the concept and benefits of implementing ontologies for solving data integration issues when data is generated by different research groups. Data management Data integration and warehousing Ontology and terminology Ontologies, Data integration, Annotation
Data harmonization and enrichment using EMBL-EBI ontology tools

This video explains how the Zooma annotation tool, the OxO mapping service and the Ontology Lookup Service (OLS) can be used to harmonise and enrich biological and biomedical data. The EMBL-EBI Ontology Tools can be used by both biological curators and software developers. Biological curators...

Scientific topics: Ontology and terminology, Data submission, annotation, and curation, Data management

Keywords: CINECA, data harmonization, Annotation, Ontologies

Resource type: Video

Data harmonization and enrichment using EMBL-EBI ontology tools http://tess.elixir-uk.org/materials/data-harmonization-and-enrichment-using-embl-ebi-ontology-tools This video explains how the Zooma annotation tool, the OxO mapping service and the Ontology Lookup Service (OLS) can be used to harmonise and enrich biological and biomedical data. The EMBL-EBI Ontology Tools can be used by both biological curators and software developers. Biological curators access the tools through their respective websites. REST APIs are available for software developers who want to build systems based on these services. Ontology and terminology Data submission, annotation, and curation Data management CINECA, data harmonization, Annotation, Ontologies biocurators software developers, bioinformaticians
Slides from Data Management Planning Workshop

Slides from Data Management Planning workshop for Life Science Projects in Ås 11 March 2020

Scientific topics: Data management

Operations: Deposition, Data retrieval, Data handling

Keywords: Data management plan, data management

Resource type: Slides

Slides from Data Management Planning Workshop http://tess.elixir-uk.org/materials/slides-from-data-management-planning-workshop-1bb3798d-4e70-423c-87b6-82ac7e5e5c54 Slides from Data Management Planning workshop for Life Science Projects in Ås 11 March 2020 Data management Data management plan, data management PhD students Post Docs Professors
Slides from Data Management Planning Workshop

Slides from Data Management Planning workshop for Life Science Projects in Bergen 04 March 2020

Scientific topics: Data management

Operations: Data handling, Data retrieval, Deposition

Keywords: Data management plan, data management

Resource type: Slides

Slides from Data Management Planning Workshop http://tess.elixir-uk.org/materials/slides-from-data-management-planning-workshop Slides from Data Management Planning workshop for Life Science Projects in Bergen 04 March 2020 Data management Data management plan, data management PhD students Post Docs Professors