ChIP-seq analysis using R - Experimental design and peak calling.
This lecture is an introduction to ChIP-seq experiments and data. It provides a theoretical background to experimental design and peak calling.
Keywords: ChIP-Seq, Experimental-design, Peak-calling, Visualisation
ChIP-seq analysis using R - Experimental design and peak calling.
https://microasp.upsc.se/ngs_trainers/Materials/tree/master/Content/ChIP-Seq/Bori_Mifsud/EMBO_Oct_2014_ChIP_seq_lecture.md
http://tess.elixir-uk.org/materials/chip-seq-analysis-using-r-experimental-design-and-peak-calling-cfd4c18f-6c86-45ae-ab0b-630422c76af6
This lecture is an introduction to ChIP-seq experiments and data. It provides a theoretical background to experimental design and peak calling.
Bori Mifsud
Kathi Zarnack
ChIP-Seq, Experimental-design, Peak-calling, Visualisation
ChIP-seq analysis using R
ChIP-seq is the most commonly used technique to study binding profiles of chromatin proteins, such as TFs or histone modification patterns. This course is an introduction to ChIP-seq data, and data analysis mainly using R, some command line based peak-callers and online software. It provides a...
Keywords: ChIP-Seq, Experimental-design, Peak-calling, Differential-binding, Visualisation, Annotation, Homo-sapiens, R-programming
ChIP-seq analysis using R
https://microasp.upsc.se/ngs_trainers/Materials/tree/master/Content/ChIP-Seq/Bori_Mifsud/README.md
http://tess.elixir-uk.org/materials/chip-seq-analysis-using-r-5049bc9c-9bbb-4a6b-9244-37ed3980da0e
ChIP-seq is the most commonly used technique to study binding profiles of chromatin proteins, such as TFs or histone modification patterns. This course is an introduction to ChIP-seq data, and data analysis mainly using R, some command line based peak-callers and online software. It provides a theoretical background and the means to perform peak calling and differential binding analysis.
Bori Mifsud
Kathi Zarnack
ChIP-Seq, Experimental-design, Peak-calling, Differential-binding, Visualisation, Annotation, Homo-sapiens, R-programming
ChIP-seq analysis using R - Practical talk
ChIP-seq is the most commonly used technique to study binding profiles of chromatin proteins, such as TFs or histone modification patterns. This practical is an introduction to ChIP-seq data analysis mainly using R, some command line based peak-callers and online software. It provides means to...
Keywords: ChIP-Seq, Peak-calling, Differential-binding, Visualisation, Annotation, Homo-sapiens, R-programming
ChIP-seq analysis using R - Practical talk
https://microasp.upsc.se/ngs_trainers/Materials/tree/master/Content/ChIP-Seq/Bori_Mifsud/EMBO_Oct_2014_ChIP_seq_practical_talk.md
http://tess.elixir-uk.org/materials/chip-seq-analysis-using-r-practical-talk
ChIP-seq is the most commonly used technique to study binding profiles of chromatin proteins, such as TFs or histone modification patterns. This practical is an introduction to ChIP-seq data analysis mainly using R, some command line based peak-callers and online software. It provides means to perform peak calling, annotation, motif search and differential binding analysis.
Bori Mifsud
Kathi Zarnack
ChIP-Seq, Peak-calling, Differential-binding, Visualisation, Annotation, Homo-sapiens, R-programming
ChIP-seq analysis using R - Practical
ChIP-seq is the most commonly used technique to study binding profiles of chromatin proteins, such as TFs or histone modification patterns. This practical is an introduction to ChIP-seq data analysis mainly using R, some command line based peak-callers and online software. It provides means to...
Keywords: ChIP-Seq, Peak-calling, Differential-binding, Visualisation, Annotation, Homo-sapiens, R-programming
ChIP-seq analysis using R - Practical
https://microasp.upsc.se/ngs_trainers/Materials/tree/master/Content/ChIP-Seq/Bori_Mifsud/EMBO_Oct_2014_ChIP_seq_practical.md
http://tess.elixir-uk.org/materials/chip-seq-analysis-using-r-practical
ChIP-seq is the most commonly used technique to study binding profiles of chromatin proteins, such as TFs or histone modification patterns. This practical is an introduction to ChIP-seq data analysis mainly using R, some command line based peak-callers and online software. It provides means to perform peak calling, annotation, motif search and differential binding analysis.
Bori Mifsud
Kathi Zarnack
ChIP-Seq, Peak-calling, Differential-binding, Visualisation, Annotation, Homo-sapiens, R-programming