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9 materials found

Authors: Manuel Corpas  or tnabtaf 


Data Manipulation - Data: Getting data into Galaxy

A collection of microtutorials explaining data manipulation within Galaxy

Resource type: Slides

User Interface and Features - Workflows: Extracting Workflows from Histories

A collection of microtutorials explaining various features of the Galaxy user interface

Questions of the tutorial:

  • What is a workflow?
  • How can I create a workflow based on my analysis history?

Objectives of the tutorial:

  • Learn how to extract a workflow from a Galaxy history
  • Learn how...

Resource type: Tutorial

Introduction to Galaxy Analyses - Introduction to Genomics and Galaxy

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Questions of the tutorial:

  • Do genes on opposite strands...

Resource type: Tutorial

Introduction to Galaxy Analyses - Options for using Galaxy

Galaxy is a scientific workflow, data integration, and data and analysis persistence and publishing platform that aims to make computational biology accessible to research scientists that do not have computer programming experience.

Questions of the tutorial:

  • Which Galaxy instance should I use?

Resource type: Slides

BioJS

Introduction to BioJS a standard for visualisation of biological data in JavaScript

Keywords: Biojs, Javascript, Software, Standards

GOBLET Training portal

Presention

Keywords: Goblet

Presentation About GOBLET Portal

This is a presentation I gave at the Jornadas de Bioinformática in Seville, Spain (24/09/14)

Keywords: Goblet, Training portal

Training Bioinformatics in the Cloud

I present the points of view, the challenges and advantages of developing training materials through the cloud.

Keywords: Advanced bioinformatics training, Cloud computing, Training

RNA-seq analysis

I give an overview of the analysis of gene expression in plants using RNA-seq data. This course provides a foundation on the tuxedo software suite: TopHat, Cufflinks, CummeRbund.