Authors: Manuel Corpas or András Aszódi
Introduction to BioJS a standard for visualisation of biological data in JavaScript
Keywords: Biojs, Javascript, Software, Standards
The aim of this course is to teach you how to perform basic statistical analysis using R. First we review the foundations (sampling theory, discrete and continuous distributions), then we focus on classical hypothesis testing. This course will improve your generic statistics knowledge....
Scientific topics: Statistics and probability
Keywords: Biostatistics, R
The purpose of this training is to teach general programming concepts using Python as an instruction tool.
Topics:
Introduction to Python: basic principles.
Python data structures: strings, tuples, lists, dictionaries, sets.
Object-oriented programming: how to model coffee machines in Python...
Scientific topics: Software engineering
Keywords: Python biologists
This course is aimed at colleagues who would like to learn how to use the statistical programming language "R". We will learn about the data structures and functions in R, and how to write R scripts.
Topics:
Introduction to R: general principles.
Data structures in R: vectors, matrices, arrays,...
Keywords: R programming
The first part of this course introduces the UNIX command line on a Linux or Mac. The second part provides a basic introduction to string searches and scripting with AWK and BASH.
Keywords: Awk, Bash, Unix
Presention
Keywords: Goblet
This is a presentation I gave at the Jornadas de Bioinformática in Seville, Spain (24/09/14)
Keywords: Goblet, Training portal
I present the points of view, the challenges and advantages of developing training materials through the cloud.
Keywords: Advanced bioinformatics training, Cloud computing, Training
I give an overview of the analysis of gene expression in plants using RNA-seq data. This course provides a foundation on the tuxedo software suite: TopHat, Cufflinks, CummeRbund.