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Authors: Malachi Griffith  or yvanlebras 

Informatics for RNA-Seq Analysis 2018 Module 4-Reference Free Alignment

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2018 Module 1-Introduction to RNA Sequencing Analysis

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2017 Module 5-Isoform Discovery and Alternative Expression

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2017 Module 4-Reference Free Alignment

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

Informatics for RNA-Seq Analysis 2017 Module 1-Introduction to RNA Sequencing Analysis

Course providing an introduction to RNA-seq data analysis followed by integrated tutorials demonstrating the use of popular RNA-seq analysis packages.

High-Throughput Biology 2017 Module 11-Isoform Discovery and Alternative Expression

Course covers the key bioinformatics concepts and tools required to analyze DNA- and RNA- sequence reads using a reference genome.

High-Throughput Biology 2017 Module 10-Reference Free Alignment

Course covers the key bioinformatics concepts and tools required to analyze DNA- and RNA- sequence reads using a reference genome.

High-Throughput Biology 2017 Module 7-Introduction to RNA Sequencing Analysis

Course covers the key bioinformatics concepts and tools required to analyze DNA- and RNA- sequence reads using a reference genome.

Variant Analysis - Introduction to Variant analysis

Exome sequencing means that all protein-coding genes in a genome are sequenced

Sequence analysis - RAD-Seq to construct genetic maps

Analyses of sequences

Questions of the tutorial:

  • How to analyze RAD sequencing data for a genetic map study?

Objectives of the tutorial:

  • SNP calling from RAD sequencing data
  • Find and correct haplotypes
  • Create input files for genetic map building software

Resource type: Tutorial

Sequence analysis - RAD-Seq de-novo data analysis

Analyses of sequences

Questions of the tutorial:

  • How to analyze RAD sequencing data without a reference genome for a population genomics study?

Objectives of the tutorial:

  • Analysis of RAD sequencing data without a reference genome
  • SNP calling from RAD sequencing data
  • Calculate...

Resource type: Tutorial

Sequence analysis - RAD-Seq Reference-based data analysis

Analyses of sequences

Questions of the tutorial:

  • How to analyze RAD sequencing data using a reference genome for a population genomics study?

Objectives of the tutorial:

  • Analysis of RAD sequencing data using a reference genome
  • SNP calling from RAD sequencing data
  • Calculate population...

Resource type: Tutorial