Authors: Jessica Kirkpatrick krkptrc... or Lars Juhl Jensen
Hands-on exercises using a variety of text-mining tools and databases based on text mining, to interpret the results from microbiome studies.
The exercises will teach you how to:
- automatically highlight named entities in a web page
- use named entity recognition for synonym-aware...
Scientific topics: Data mining, Natural language processing, Metagenomics, Microbial ecology
Hands-on exercises using the STRING, STITCH, and DISEASES databases through their respective web interfaces. The exercises will teach you how to:
- retrieve a STRING network for a protein of interest *...
Scientific topics: Protein interactions, Molecular interactions, pathways and networks, Bioinformatics
Hands-on exercises using the stringApp for Cytoscape to retrieve molecular networks from the STRING and STITCH databases.
The exercises will teach you how to:
- retrieve...
Scientific topics: Data visualisation, Proteomics, Protein interactions, Molecular interactions, pathways and networks, Bioinformatics