Register training material
10 materials found

Authors: Jan Slifka  or Martin Čech 


Hands-on for 'Galaxy Webhooks' tutorial

The questions this addresses are:
- What are Galaxy Webhooks?
- How to create them?

The objectives are:
- Discover what Galaxy Webhooks are
- Be able to create Webhooks
- Be able to add a Galaxy Webhook in a Galaxy instance

Keywords: dev

Resource type: hands-on tutorial

Hands-on for 'Galaxy Tool Management with Ephemeris' tutorial

The questions this addresses are:
- How to install, update, and maintain Galaxy tools?
- How to extract a list of tools from a workflow or Galaxy instance?

The objectives are:
- Learn about Ephemeris
- Extract a list of tools from a workflow
- Install these tools on a given Galaxy

Keywords: admin, tools, git-gat

Resource type: hands-on tutorial

Hands-on for 'Understanding Galaxy history system' tutorial

The questions this addresses are:
- How do Galaxy histories work?

The objectives are:
- Gain understanding on navigating and manipulating histories

Keywords: galaxy-interface

Resource type: hands-on tutorial

Slides for 'Galaxy Webhooks' tutorial

The questions this addresses are:
- What are Galaxy Webhooks?
- How to create them?

The objectives are:
- Discover what Galaxy Webhooks are
- Be able to create Webhooks
- Be able to add a Galaxy Webhook in a Galaxy instance

Keywords: dev

Resource type: slides

Slides for 'Storage Management' tutorial

The questions this addresses are:
- How does Galaxy locate data?
- How can I have Galaxy use multiple storage locations?

The objectives are:
- Setup Galaxy with both the Hierarachical and Distributed Object Storages

Keywords: admin

Resource type: slides

Slides for 'External Authentication' tutorial

The questions this addresses are:
- How can I connect Galaxy with CAS, SAML, etc.

The objectives are:
- be familiar with configuring Galaxy to use an upstream (proxy) authentication provider
- be able to log in to your Galaxy server with a file-configured user.

Keywords: admin

Resource type: slides

Slides for 'Galaxy Tool Management with Ephemeris' tutorial

The questions this addresses are:
- How are tools configured on a Galaxy instance?
- What is the Galaxy Tool Shed?
- How are Galaxy tools installed?
- What is ephemeris and how can it be used to manage tools on a Galaxy instance?

Keywords: admin

Resource type: slides

DS Wizard and its Use

This training gives an overview and explains what is the purpose of smart data management plans as living documents, core ideas behind Data Stewardship Wizard, and how to use it in practice. Furthermore, it shows the versability of DSW, its top-notch features that make...

Scientific topics: Data management

Keywords: DMP, DMP tools, data stewardship, FAIR, FAIR data

Resource type: Presentation

A Gentle Introduction to DSW for Convergers

Data Stewardship Wizard brings together data stewards and researchers to efficiently compose data management plans (DMPs) for their research projects. Data stewards capture their knowledge and expertise in so-called knowledge models that are turned into smart...

Scientific topics: Data management, Data governance

Keywords: Data managment plan, data stewardship, data management, software tools

Resource type: Video, Slides, Webinar

Data Stewardship Wizard Workshop (Feb 2020)

Data Stewardship Wizard brings together data stewards and researchers to allow managing data in projects efficiently and in a FAIR manner. Data stewards can easily capture the knowledge including required project data and decisions in knowledge models that are then turned into...

Scientific topics: Data governance, Data management

Keywords: Data management plan, data stewardship, FAIR, data management, software tools

Resource type: Video, Webinar, Slides