hands-on tutorial

Hands-on for 'Genome annotation with Funannotate' tutorial

The questions this addresses are:
- How to annotate an eukaryotic genome with Funannotate?
- How to perform functional annotation?
- How to evaluate and visualize annotated genomic features?
- How to format the annotation for submission at NCBI?

The objectives are:
- Load genome into Galaxy
- Annotate genome with Funannotate
- Perform functional annotation using EggNOG-mapper and InterProScan
- Evaluate annotation quality with BUSCO
- View annotations in JBrowse

Licence: Creative Commons Attribution 4.0 International

Keywords: genome-annotation, eukaryote

Target audience: Students

Resource type: hands-on tutorial

Authors: Anthony Bretaudeau


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