hands-on tutorial

Hands-on for 'Annotating a protein list identified by LC-MS/MS experiments' tutorial

The questions this addresses are:
- How to filter out technical contaminants?
- How to check for tissue-specificity?
- How to perform enrichment analysis?
- How to map your protein list to pathways (Reactome)?
- How to compare your proteome with other studies?

The objectives are:
- Execute a complete annotation pipeline of a protein list identified by LC-MS/MS experiments

Licence: Creative Commons Attribution 4.0 International

Keywords: proteomics, DDA, human

Target audience: Students

Resource type: hands-on tutorial

Authors: David Christiany, Florence Combes, Valentin Loux, Yves Vandenbrouck

Contributors: David Christiany, Florence Combes, Valentin Loux, Yves Vandenbrouck


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