Date: 3 - 7 June 2019

Loading map...

This 5-day duration summer school will focus on user-friendly tools for metabolic model reconstruction and simulation and experimental procedures to improve those models.
The course is directed to everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required.

Course attendants will be participating in activities covering the following topics:
- Basic concepts in metabolic modelling
- Genome annotation and metabolic model reconstruction with merlin.
- KBase: A collaborative, open environment for systems biology of plants, microbes and their communities.
- Optflux: an open-source software platform for in silico metabolic engineering.
- Experimental determination of biomass composition and its inclusion in genome-scale metabolic models.
- Experimental metabolomics analysis using GC-MS and its inclusion in genome-scale metabolic models.

Contact: s2m2.course@gmail.com

Keywords: metabolic modelling, Genome, open-source software platform

Venue: University of Minho - Campus of Gualtar, Rua da Universidade

City: Braga

Region: Portugal

Country: Portugal

Postcode: 4710-057 Braga

Organizer: Universidade do Minho

Host institutions: Universidade do Minho

Eligibility:

  • Registration of interest

Target audience: everyone who is interested in learning to use metabolic modelling in their research, using user-friendly tools. No programming skills are required.

Capacity: 20

Event types:

  • Workshops and courses


Activity log