United Kingdom
Introduction to RNA-seq and ChIP-seq data analysis
Date: 22 - 23 June 2017
Timezone: London
The aim of this course is to familiarize the participants with the primary analysis of datasets generated through two popular high-throughput sequencing (HTS) assays: ChIP-seq and RNA-seq.
This course starts with a brief introduction to the transition from capillary to high-throughput sequencing (HTS) and discusses quality control issues, which are common among all HTS datasets. Next, we will present the alignment step and how it differs between the two analysis workflows. Finally, we focus on dataset specific downstream analysis, including peak calling and motif analysis for ChIP-seq and quantification of expression, transcriptome assembly and differential expression analysis for RNA-seq.
Please note that if you are not eligible for a University of Cambridge Raven account you will need to book or register your interest by linking here.''
Keywords: HDRUK
Venue: Craik-Marshall Building
City: Cambridge
Country: United Kingdom
Postcode: CB2 3AR
Organizer: University of Cambridge
Host institutions: University of Cambridge Bioinformatics Training
Eligibility:
- First come first served
Target audience: Graduate students, Postdocs and Staff members from the University of Cambridge, Institutions and other external Institutions or individuals
Capacity: 42
Event types:
- Workshops and courses
Scientific topics: Bioinformatics, Epigenomics, Functional genomics, Data visualisation, Transcriptomics, Data mining, ChIP-seq
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